STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR06915.1Oligopeptide-binding protein OppA precursor. (546 aa)    
Predicted Functional Partners:
APR07780.1
Oligopeptide transport system permease protein OppB.
  
 0.804
APR07781.1
Oligopeptide transport system permease protein OppC.
  
 0.791
APR07782.1
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
  
 0.659
APR07783.1
Oligopeptide transport ATP-binding protein OppF.
  
 0.584
APR06956.1
Dipeptide-binding protein DppE precursor.
  
  
 
0.482
APR07140.1
Oligopeptide-binding protein OppA precursor.
  
  
 
0.473
APR06979.1
Oligopeptide-binding protein OppA precursor.
  
  
 
0.465
APR06914.1
Hypothetical protein.
       0.452
APR07079.1
Dipeptide-binding protein DppE precursor.
  
  
 
0.436
APR07106.1
Oligopeptide-binding protein OppA precursor.
  
  
 
0.427
Your Current Organism:
Lactobacillus parabuchneri
NCBI taxonomy Id: 152331
Other names: ATCC 49374, CCUG 32261, CIP 103368, CIP 106749 [[Lactobacillus ferintoshensis Simpson et al. 2002]], DSM 5707, JCM 12493, JCM 12511 [[Lactobacillus ferintoshensis Simpson et al. 2002]], L. parabuchneri, LMG 11457, LMG:11457, Lactobacillus ferintoshensis, Lactobacillus ferintoshensis Simpson et al. 2002, NBRC 107865, NCDO 2748, NCIMB 8838, strain R7-84 [[Lactobacillus ferintoshensis Simpson et al. 2002]], strain R7-84(T) [[Lactobacillus ferintoshensis Simpson et al. 2002]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.