Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APR07142.1 | APR07143.1 | FAM21731_00941 | FAM21731_00942 | Succinyl-diaminopimelate desuccinylase. | Imidazolonepropionase. | 0.821 |
APR07142.1 | APR07144.1 | FAM21731_00941 | FAM21731_00943 | Succinyl-diaminopimelate desuccinylase. | Imidazolonepropionase. | 0.708 |
APR07142.1 | APR07145.1 | FAM21731_00941 | FAM21731_00944 | Succinyl-diaminopimelate desuccinylase. | Hypothetical protein. | 0.562 |
APR07143.1 | APR07142.1 | FAM21731_00942 | FAM21731_00941 | Imidazolonepropionase. | Succinyl-diaminopimelate desuccinylase. | 0.821 |
APR07143.1 | APR07144.1 | FAM21731_00942 | FAM21731_00943 | Imidazolonepropionase. | Imidazolonepropionase. | 0.637 |
APR07143.1 | APR07145.1 | FAM21731_00942 | FAM21731_00944 | Imidazolonepropionase. | Hypothetical protein. | 0.816 |
APR07144.1 | APR07142.1 | FAM21731_00943 | FAM21731_00941 | Imidazolonepropionase. | Succinyl-diaminopimelate desuccinylase. | 0.708 |
APR07144.1 | APR07143.1 | FAM21731_00943 | FAM21731_00942 | Imidazolonepropionase. | Imidazolonepropionase. | 0.637 |
APR07144.1 | APR07145.1 | FAM21731_00943 | FAM21731_00944 | Imidazolonepropionase. | Hypothetical protein. | 0.846 |
APR07145.1 | APR07142.1 | FAM21731_00944 | FAM21731_00941 | Hypothetical protein. | Succinyl-diaminopimelate desuccinylase. | 0.562 |
APR07145.1 | APR07143.1 | FAM21731_00944 | FAM21731_00942 | Hypothetical protein. | Imidazolonepropionase. | 0.816 |
APR07145.1 | APR07144.1 | FAM21731_00944 | FAM21731_00943 | Hypothetical protein. | Imidazolonepropionase. | 0.846 |