STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR07191.1Putative 3-hydroxybutyryl-CoA dehydrogenase. (296 aa)    
Predicted Functional Partners:
APR07407.1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.989
APR06503.1
2-hydroxy-3-oxopropionate reductase.
     
 0.907
APR08095.1
Putative 3-hydroxybutyryl-CoA dehydrogenase.
  
  
 
0.906
menB
1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).
      0.902
APR07301.1
Putative 3-hydroxybutyryl-CoA dehydrogenase.
  
  
 
0.901
APR08627.1
Polyketide biosynthesis 3-hydroxy-3-methylglutaryl-ACP synthase PksG.
     
  0.900
APR08212.1
Phosphate acetyltransferase.
    
 0.833
APR06831.1
Acyl-CoA dehydrogenase.
 
 0.712
APR06833.1
Acryloyl-CoA reductase electron transfer subunit beta.
  
 
 0.608
APR07036.1
Glutamate synthase [NADPH] large chain.
   
  
 0.483
Your Current Organism:
Lactobacillus parabuchneri
NCBI taxonomy Id: 152331
Other names: ATCC 49374, CCUG 32261, CIP 103368, CIP 106749 [[Lactobacillus ferintoshensis Simpson et al. 2002]], DSM 5707, JCM 12493, JCM 12511 [[Lactobacillus ferintoshensis Simpson et al. 2002]], L. parabuchneri, LMG 11457, LMG:11457, Lactobacillus ferintoshensis, Lactobacillus ferintoshensis Simpson et al. 2002, NBRC 107865, NCDO 2748, NCIMB 8838, strain R7-84 [[Lactobacillus ferintoshensis Simpson et al. 2002]], strain R7-84(T) [[Lactobacillus ferintoshensis Simpson et al. 2002]]
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