STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR07365.1Oligopeptide-binding protein AppA precursor. (600 aa)    
Predicted Functional Partners:
APR07363.1
Glutathione transport system permease protein GsiC.
 
 0.993
APR07364.1
Oligopeptide transport system permease protein OppC.
 
 0.993
APR07361.1
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
 
 0.991
APR07044.1
Oligopeptide-binding protein AppA precursor.
  
  
 
0.902
APR07362.1
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
  
 0.898
APR07780.1
Oligopeptide transport system permease protein OppB.
  
 
 0.504
APR06381.1
Glutamine transport system permease protein GlnP.
  
 
 0.457
APR06400.1
Arginine transport system permease protein ArtQ.
  
 
 0.457
APR07781.1
Oligopeptide transport system permease protein OppC.
  
 
 0.457
APR07588.1
Carnitine transport binding protein OpuCC precursor.
     
 0.422
Your Current Organism:
Lactobacillus parabuchneri
NCBI taxonomy Id: 152331
Other names: ATCC 49374, CCUG 32261, CIP 103368, CIP 106749 [[Lactobacillus ferintoshensis Simpson et al. 2002]], DSM 5707, JCM 12493, JCM 12511 [[Lactobacillus ferintoshensis Simpson et al. 2002]], L. parabuchneri, LMG 11457, LMG:11457, Lactobacillus ferintoshensis, Lactobacillus ferintoshensis Simpson et al. 2002, NBRC 107865, NCDO 2748, NCIMB 8838, strain R7-84 [[Lactobacillus ferintoshensis Simpson et al. 2002]], strain R7-84(T) [[Lactobacillus ferintoshensis Simpson et al. 2002]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.