STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR07521.1Hypothetical protein. (104 aa)    
Predicted Functional Partners:
APR06658.1
Hypothetical protein.
  
     0.768
APR07397.1
Hypothetical protein.
  
     0.749
APR07639.1
Hypothetical protein.
  
     0.736
APR06703.1
Hypothetical protein.
  
     0.719
APR07841.1
Hypothetical protein.
  
     0.695
APR07987.1
Hypothetical protein.
  
     0.683
APR07351.1
Glyoxalase-like domain protein.
  
     0.676
APR06702.1
Helix-turn-helix protein.
  
     0.649
APR08614.1
Hypothetical protein.
  
     0.648
APR08593.1
Hypothetical protein.
  
     0.643
Your Current Organism:
Lactobacillus parabuchneri
NCBI taxonomy Id: 152331
Other names: ATCC 49374, CCUG 32261, CIP 103368, CIP 106749 [[Lactobacillus ferintoshensis Simpson et al. 2002]], DSM 5707, JCM 12493, JCM 12511 [[Lactobacillus ferintoshensis Simpson et al. 2002]], L. parabuchneri, LMG 11457, LMG:11457, Lactobacillus ferintoshensis, Lactobacillus ferintoshensis Simpson et al. 2002, NBRC 107865, NCDO 2748, NCIMB 8838, strain R7-84 [[Lactobacillus ferintoshensis Simpson et al. 2002]], strain R7-84(T) [[Lactobacillus ferintoshensis Simpson et al. 2002]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.