STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IP78_12035Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa)    
Predicted Functional Partners:
IP78_12030
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.885
IP78_14120
Phage capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.799
IP78_11335
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.780
IP78_12040
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.780
IP78_12810
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.760
IP78_12815
Peptidase P60; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.757
IP78_12805
Glycoside hydrolase family 24; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.755
IP78_09005
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.754
IP78_04265
Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.750
IP78_12820
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.731
Your Current Organism:
Brevundimonas sp. AAP58
NCBI taxonomy Id: 1523422
Other names: B. sp. AAP58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.