STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IP81_06805Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)    
Predicted Functional Partners:
IP81_12580
Pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
 0.999
IP81_03265
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
IP81_12780
Branched-chain alpha-keto acid dehydrogenase subunit E2; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
 0.998
IP81_08915
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
IP81_02850
Dihydrolipoamide acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.996
IP81_04905
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.996
IP81_06785
Dihydrolipoamide acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.996
IP81_06810
Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.996
IP81_08280
Biotin attachment protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.996
IP81_10925
Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
  
 0.996
Your Current Organism:
Novosphingobium sp. AAP83
NCBI taxonomy Id: 1523425
Other names: N. sp. AAP83
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