STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IP83_00290Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1198 aa)    
Predicted Functional Partners:
IP83_00285
Catalyzes the hydrolysis of allophanate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
IP83_15370
Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
IP83_15375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.996
IP83_15365
Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
 
 0.993
IP83_00390
Hypothetical protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.983
IP83_17205
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.983
IP83_00400
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.970
IP83_08720
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.970
IP83_00380
Biotin carboxyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.951
IP83_00295
Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.950
Your Current Organism:
Novosphingobium sp. AAP93
NCBI taxonomy Id: 1523427
Other names: N. sp. AAP93
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.