STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IP86_13695CAAX protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)    
Predicted Functional Partners:
IP86_13690
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.952
IP86_13675
Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.833
IP86_13680
Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.793
IP86_13685
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.792
IP86_27765
Cytochrome C; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
  
 0.704
IP86_02370
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.565
IP86_04535
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.565
IP86_04545
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.554
IP86_00650
Copper resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.552
IP86_09180
Vitamin K epoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.515
Your Current Organism:
Rhodopseudomonas sp. AAP120
NCBI taxonomy Id: 1523430
Other names: R. sp. AAP120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.