STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IX84_01975Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)    
Predicted Functional Partners:
IX84_23925
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
IX84_01960
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.680
IX84_25635
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.643
IX84_04160
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.600
IX84_15540
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.579
IX84_18880
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.564
IX84_26040
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.545
IX84_23465
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.534
IX84_23630
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.534
IX84_01980
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.532
Your Current Organism:
Phaeodactylibacter xiamenensis
NCBI taxonomy Id: 1524460
Other names: KCTC 32575, MCCC 1F01213, P. xiamenensis, Phaeodactylibacter xiamenensis Chen et al. 2014, Saprospiraceae bacterium KD52, bacterium KD52, strain KD52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.