STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IX84_09305Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa)    
Predicted Functional Partners:
IX84_17655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.788
IX84_31080
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.765
IX84_09300
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.750
IX84_08275
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.693
IX84_08280
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.693
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
  0.679
IX84_09440
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.669
IX84_19455
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.632
IX84_19460
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.632
IX84_14200
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.607
Your Current Organism:
Phaeodactylibacter xiamenensis
NCBI taxonomy Id: 1524460
Other names: KCTC 32575, MCCC 1F01213, P. xiamenensis, Phaeodactylibacter xiamenensis Chen et al. 2014, Saprospiraceae bacterium KD52, bacterium KD52, strain KD52
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.