STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IX84_15970Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)    
Predicted Functional Partners:
IX84_15965
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.709
IX84_26460
MIP (Major intrinsic protein) family permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.703
IX84_28455
Aldehyde oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.654
IX84_28105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.625
IX84_27295
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.616
IX84_15975
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.
       0.576
IX84_15980
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.547
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
   
   0.488
IX84_27420
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.483
IX84_27425
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.483
Your Current Organism:
Phaeodactylibacter xiamenensis
NCBI taxonomy Id: 1524460
Other names: KCTC 32575, MCCC 1F01213, P. xiamenensis, Phaeodactylibacter xiamenensis Chen et al. 2014, Saprospiraceae bacterium KD52, bacterium KD52, strain KD52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.