STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IX84_19075Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)    
Predicted Functional Partners:
IX84_04995
Pyruvate ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.852
IX84_28105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.841
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
 
 0.800
IX84_15560
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.749
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.708
IX84_00300
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.625
IX84_28470
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.625
IX84_29145
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.625
IX84_31110
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.543
IX84_19070
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.525
Your Current Organism:
Phaeodactylibacter xiamenensis
NCBI taxonomy Id: 1524460
Other names: KCTC 32575, MCCC 1F01213, P. xiamenensis, Phaeodactylibacter xiamenensis Chen et al. 2014, Saprospiraceae bacterium KD52, bacterium KD52, strain KD52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.