STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IX84_19770Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)    
Predicted Functional Partners:
IX84_16790
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.834
IX84_15385
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.763
IX84_28090
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.645
IX84_19775
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.601
IX84_22575
N-acylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.531
IX84_07790
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.521
IX84_22580
Tat pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.510
IX84_27345
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.507
IX84_26240
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.504
IX84_01005
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.470
Your Current Organism:
Phaeodactylibacter xiamenensis
NCBI taxonomy Id: 1524460
Other names: KCTC 32575, MCCC 1F01213, P. xiamenensis, Phaeodactylibacter xiamenensis Chen et al. 2014, Saprospiraceae bacterium KD52, bacterium KD52, strain KD52
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.