STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpsAGlycerol 3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (350 aa)    
Predicted Functional Partners:
IX84_23310
Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.932
IX84_28105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.932
der
GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
 0.929
IX84_15920
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.845
IX84_09415
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.818
IX84_17020
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.654
IX84_16665
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.649
IX84_00510
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.635
gpmI
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
 
 0.623
IX84_23580
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.546
Your Current Organism:
Phaeodactylibacter xiamenensis
NCBI taxonomy Id: 1524460
Other names: KCTC 32575, MCCC 1F01213, P. xiamenensis, Phaeodactylibacter xiamenensis Chen et al. 2014, Saprospiraceae bacterium KD52, bacterium KD52, strain KD52
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.