STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IX84_24710Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)    
Predicted Functional Partners:
IX84_10120
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.834
IX84_30085
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.810
IX84_24705
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.797
IX84_23060
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.774
IX84_12120
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.766
IX84_20005
Glycosyl hydrolase family 109; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.733
IX84_26260
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.730
IX84_22870
4,5-dihydroxyphthalate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.710
IX84_23335
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.681
IX84_23340
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.678
Your Current Organism:
Phaeodactylibacter xiamenensis
NCBI taxonomy Id: 1524460
Other names: KCTC 32575, MCCC 1F01213, P. xiamenensis, Phaeodactylibacter xiamenensis Chen et al. 2014, Saprospiraceae bacterium KD52, bacterium KD52, strain KD52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.