STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IX84_27750Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)    
Predicted Functional Partners:
IX84_17855
Molybdenum cofactor biosynthesis protein MoeB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.922
selD
Hypothetical protein; Synthesizes selenophosphate from selenide and ATP.
   
 0.889
IX84_09130
Nitric oxide dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.884
IX84_14925
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.884
IX84_28495
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.865
IX84_28105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.852
IX84_27755
Selenocysteine lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.810
IX84_29820
Cysteine desulfurase; Catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
  
 
0.809
IX84_27760
Phosphoglucosamine mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.775
IX84_00300
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.750
Your Current Organism:
Phaeodactylibacter xiamenensis
NCBI taxonomy Id: 1524460
Other names: KCTC 32575, MCCC 1F01213, P. xiamenensis, Phaeodactylibacter xiamenensis Chen et al. 2014, Saprospiraceae bacterium KD52, bacterium KD52, strain KD52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.