STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IX84_28130Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (118 aa)    
Predicted Functional Partners:
IX84_08670
uroporphyrinogen-III synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.721
IX84_29200
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.712
IX84_12910
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.703
IX84_05415
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.699
IX84_29865
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.668
IX84_16075
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.666
IX84_09825
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.639
IX84_09095
Hypothetical protein; Modulates RecA activity; Belongs to the RecX family.
  
     0.633
rimM
Hypothetical protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.
  
     0.632
IX84_10940
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.630
Your Current Organism:
Phaeodactylibacter xiamenensis
NCBI taxonomy Id: 1524460
Other names: KCTC 32575, MCCC 1F01213, P. xiamenensis, Phaeodactylibacter xiamenensis Chen et al. 2014, Saprospiraceae bacterium KD52, bacterium KD52, strain KD52
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.