STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IX84_28535Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (630 aa)    
Predicted Functional Partners:
IX84_02680
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
IX84_02705
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
IX84_09300
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.765
IX84_14480
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.765
IX84_08210
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.750
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
    
  0.728
IX84_01970
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.723
IX84_17655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.718
IX84_07105
Molecular chaperone Hsp90; Molecular chaperone. Has ATPase activity.
   
  0.714
IX84_31080
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.695
Your Current Organism:
Phaeodactylibacter xiamenensis
NCBI taxonomy Id: 1524460
Other names: KCTC 32575, MCCC 1F01213, P. xiamenensis, Phaeodactylibacter xiamenensis Chen et al. 2014, Saprospiraceae bacterium KD52, bacterium KD52, strain KD52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.