STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IV04_09615DNA-3-methyladenine glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)    
Predicted Functional Partners:
IV04_09610
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.803
IV04_20770
Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
   
 0.727
IV04_09620
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.606
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.551
IV04_15980
Ada; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.549
IV04_09605
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.445
Your Current Organism:
Serratia sp. Ag1
NCBI taxonomy Id: 1524467
Other names: S. sp. Ag1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.