STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE03_10258Uncharacterized protein. (887 aa)    
Predicted Functional Partners:
VE03_07551
Uncharacterized protein.
    
 0.651
VE03_00701
Uncharacterized protein.
    
 0.625
VE03_09804
Serine/threonine-protein phosphatase.
    
  0.614
VE03_06357
BZIP domain-containing protein.
    
  0.602
VE03_10120
Uncharacterized protein.
    
 0.600
VE03_04645
Ubiquitin-conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.577
VE03_05576
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
  0.577
VE03_09021
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
  0.571
VE03_00214
Uncharacterized protein.
    
  0.571
VE03_04463
Uncharacterized protein.
    
  0.568
Your Current Organism:
Pseudogymnoascus sp. 233421I1
NCBI taxonomy Id: 1524831
Other names: P. sp. 23342-1-I1, Pseudogymnoascus sp. 23342-1-I1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.