STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE03_07049Uncharacterized protein; Belongs to the arginase family. (130 aa)    
Predicted Functional Partners:
VE03_05725
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 
 0.793
VE03_05789
Ornithine aminotransferase.
  
 0.751
VE03_05975
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 0.709
VE03_05378
Uncharacterized protein.
    
 0.682
VE03_10200
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.648
VE03_08679
Uncharacterized protein.
  
 0.648
VE03_04617
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.648
VE03_00942
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.648
VE03_05254
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
 
 0.647
VE03_03185
Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family.
     
 0.609
Your Current Organism:
Pseudogymnoascus sp. 233421I1
NCBI taxonomy Id: 1524831
Other names: P. sp. 23342-1-I1, Pseudogymnoascus sp. 23342-1-I1
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