STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE03_05076HTH APSES-type domain-containing protein. (508 aa)    
Predicted Functional Partners:
VE03_10512
ANK_REP_REGION domain-containing protein.
   
  0.618
VE03_09444
Uncharacterized protein.
   
  0.611
VE03_05741
Uncharacterized protein.
    
  0.469
VE03_07477
Uncharacterized protein.
    
  0.457
VE03_00958
MRG domain-containing protein.
    
  0.455
VE03_08125
Uncharacterized protein.
    
  0.454
VE03_06357
BZIP domain-containing protein.
    
  0.452
VE03_09534
MHYT domain-containing protein.
    
  0.435
VE03_07962
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
  0.428
VE03_09334
Ubiquitin-like domain-containing protein.
    
  0.420
Your Current Organism:
Pseudogymnoascus sp. 233421I1
NCBI taxonomy Id: 1524831
Other names: P. sp. 23342-1-I1, Pseudogymnoascus sp. 23342-1-I1
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