STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE03_04291RING-type domain-containing protein. (598 aa)    
Predicted Functional Partners:
VE03_06357
BZIP domain-containing protein.
    
 0.818
VE03_04290
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
 
 
 
  0.818
VE03_05185
P/Homo B domain-containing protein.
    
  0.788
VE03_08248
Ubiquitin-like domain-containing protein.
    
 0.751
VE03_05740
Uncharacterized protein.
    
 0.751
VE03_08580
HECT domain-containing protein.
     
 0.658
VE03_07111
Uncharacterized protein.
    
 0.649
VE03_01174
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
  0.644
VE03_02604
UV excision repair protein Rad23.
    
 0.643
VE03_08491
Glucanase; Belongs to the glycosyl hydrolase family 6.
    
  0.619
Your Current Organism:
Pseudogymnoascus sp. 233421I1
NCBI taxonomy Id: 1524831
Other names: P. sp. 23342-1-I1, Pseudogymnoascus sp. 23342-1-I1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.