Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEA00771.1 | SEA04594.1 | SAMN04488051_101318 | SAMN04488051_101468 | SH3 domain protein. | Cell division protein FtsN. | 0.692 |
SEA00771.1 | SEA06224.1 | SAMN04488051_101318 | SAMN04488051_101527 | SH3 domain protein. | N-acetylmuramoyl-L-alanine amidase. | 0.749 |
SEA00771.1 | SEA42226.1 | SAMN04488051_101318 | SAMN04488051_103144 | SH3 domain protein. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.656 |
SEA00771.1 | SEA44807.1 | SAMN04488051_101318 | SAMN04488051_103244 | SH3 domain protein. | Flagellar protein FlgJ. | 0.684 |
SEA00771.1 | SEA90110.1 | SAMN04488051_101318 | SAMN04488051_10887 | SH3 domain protein. | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.669 |
SEA00771.1 | SEA92923.1 | SAMN04488051_101318 | SAMN04488051_10941 | SH3 domain protein. | DedD protein. | 0.766 |
SEA00771.1 | guaA | SAMN04488051_101318 | SAMN04488051_10188 | SH3 domain protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.757 |
SEA00771.1 | guaB | SAMN04488051_101318 | SAMN04488051_10189 | SH3 domain protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.669 |
SEA00771.1 | pyrF | SAMN04488051_101318 | SAMN04488051_11216 | SH3 domain protein. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.664 |
SEA00771.1 | tdk | SAMN04488051_101318 | SAMN04488051_103172 | SH3 domain protein. | Thymidine kinase. | 0.656 |
SEA04594.1 | SEA00771.1 | SAMN04488051_101468 | SAMN04488051_101318 | Cell division protein FtsN. | SH3 domain protein. | 0.692 |
SEA04594.1 | SEA06224.1 | SAMN04488051_101468 | SAMN04488051_101527 | Cell division protein FtsN. | N-acetylmuramoyl-L-alanine amidase. | 0.902 |
SEA04594.1 | SEA92923.1 | SAMN04488051_101468 | SAMN04488051_10941 | Cell division protein FtsN. | DedD protein. | 0.568 |
SEA06224.1 | SEA00771.1 | SAMN04488051_101527 | SAMN04488051_101318 | N-acetylmuramoyl-L-alanine amidase. | SH3 domain protein. | 0.749 |
SEA06224.1 | SEA04594.1 | SAMN04488051_101527 | SAMN04488051_101468 | N-acetylmuramoyl-L-alanine amidase. | Cell division protein FtsN. | 0.902 |
SEA06224.1 | SEA42226.1 | SAMN04488051_101527 | SAMN04488051_103144 | N-acetylmuramoyl-L-alanine amidase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.602 |
SEA06224.1 | SEA44807.1 | SAMN04488051_101527 | SAMN04488051_103244 | N-acetylmuramoyl-L-alanine amidase. | Flagellar protein FlgJ. | 0.785 |
SEA06224.1 | SEA90110.1 | SAMN04488051_101527 | SAMN04488051_10887 | N-acetylmuramoyl-L-alanine amidase. | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.711 |
SEA06224.1 | SEA92923.1 | SAMN04488051_101527 | SAMN04488051_10941 | N-acetylmuramoyl-L-alanine amidase. | DedD protein. | 0.705 |
SEA06224.1 | guaA | SAMN04488051_101527 | SAMN04488051_10188 | N-acetylmuramoyl-L-alanine amidase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.882 |
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