STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA08126.1Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. (386 aa)    
Predicted Functional Partners:
SEA80690.1
O-acetylhomoserine (thiol)-lyase.
 
 
 0.933
SEA76641.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 
 0.914
SDZ96509.1
Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family.
 
 
 0.848
SDZ96074.1
Homoserine dehydrogenase.
 
 
 0.842
SEA08096.1
H+/gluconate symporter.
       0.774
SEA25621.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
    
 0.758
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
    
 0.730
SEA86819.1
Serine O-acetyltransferase.
    
 0.716
SEA69146.1
Acetolactate synthase, small subunit.
 
  
 0.711
trpC
Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
  
 
 0.707
Your Current Organism:
Alkalimonas amylolytica
NCBI taxonomy Id: 152573
Other names: A. amylolytica, Alkalimonas amylolytica Ma et al. 2007, CGMCC 1.3430, DSM 18337, gamma proteobacterium N10, strain N10
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