STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA25791.1Carbon starvation protein. (560 aa)    
Predicted Functional Partners:
SEA25765.1
Hypothetical protein.
 
     0.950
SEA25744.1
Arsenite-transporting ATPase.
 
     0.948
SEA57247.1
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
    0.783
SEA07852.1
Signal transduction histidine kinase.
  
  
 0.670
SEA27386.1
PAS domain S-box-containing protein.
  
  
 0.670
SEA20870.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
    0.660
SEA00831.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
  
 0.645
SEA18726.1
propionyl-CoA synthetase.
   
    0.621
acsA
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
   
    0.621
SEA40131.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
    0.621
Your Current Organism:
Alkalimonas amylolytica
NCBI taxonomy Id: 152573
Other names: A. amylolytica, Alkalimonas amylolytica Ma et al. 2007, CGMCC 1.3430, DSM 18337, gamma proteobacterium N10, strain N10
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