Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEA32006.1 | SEA32034.1 | SAMN04488051_102532 | SAMN04488051_102533 | neurotransmitter:Na+ symporter, NSS family. | Hypothetical protein. | 0.522 |
SEA32006.1 | SEA32060.1 | SAMN04488051_102532 | SAMN04488051_102534 | neurotransmitter:Na+ symporter, NSS family. | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.521 |
SEA32034.1 | SEA32006.1 | SAMN04488051_102533 | SAMN04488051_102532 | Hypothetical protein. | neurotransmitter:Na+ symporter, NSS family. | 0.522 |
SEA32034.1 | SEA32060.1 | SAMN04488051_102533 | SAMN04488051_102534 | Hypothetical protein. | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.767 |
SEA32034.1 | SEA81462.1 | SAMN04488051_102533 | SAMN04488051_106285 | Hypothetical protein. | DnaA initiator-associating protein. | 0.424 |
SEA32034.1 | lptA | SAMN04488051_102533 | SAMN04488051_101631 | Hypothetical protein. | Lipopolysaccharide export system protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. | 0.495 |
SEA32034.1 | mnmC | SAMN04488051_102533 | SAMN04488051_10949 | Hypothetical protein. | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.401 |
SEA32060.1 | SEA32006.1 | SAMN04488051_102534 | SAMN04488051_102532 | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | neurotransmitter:Na+ symporter, NSS family. | 0.521 |
SEA32060.1 | SEA32034.1 | SAMN04488051_102534 | SAMN04488051_102533 | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Hypothetical protein. | 0.767 |
SEA81462.1 | SEA32034.1 | SAMN04488051_106285 | SAMN04488051_102533 | DnaA initiator-associating protein. | Hypothetical protein. | 0.424 |
lptA | SEA32034.1 | SAMN04488051_101631 | SAMN04488051_102533 | Lipopolysaccharide export system protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. | Hypothetical protein. | 0.495 |
mnmC | SEA32034.1 | SAMN04488051_10949 | SAMN04488051_102533 | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | Hypothetical protein. | 0.401 |