Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ92191.1 | SEA05170.1 | SAMN04488051_10121 | SAMN04488051_101492 | Glutamate synthase (NADPH/NADH) large chain. | Glutamine synthetase. | 0.977 |
SDZ92191.1 | SEA41184.1 | SAMN04488051_10121 | SAMN04488051_10395 | Glutamate synthase (NADPH/NADH) large chain. | Phosphotransferase system IIA component. | 0.427 |
SDZ92191.1 | carB | SAMN04488051_10121 | SAMN04488051_104300 | Glutamate synthase (NADPH/NADH) large chain. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.956 |
SDZ92191.1 | glmS | SAMN04488051_10121 | SAMN04488051_105102 | Glutamate synthase (NADPH/NADH) large chain. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.940 |
SDZ92191.1 | glmU | SAMN04488051_10121 | SAMN04488051_10582 | Glutamate synthase (NADPH/NADH) large chain. | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.420 |
SDZ92191.1 | purA | SAMN04488051_10121 | SAMN04488051_101519 | Glutamate synthase (NADPH/NADH) large chain. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.732 |
SDZ92191.1 | purL | SAMN04488051_10121 | SAMN04488051_11181 | Glutamate synthase (NADPH/NADH) large chain. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.906 |
SEA05170.1 | SDZ92191.1 | SAMN04488051_101492 | SAMN04488051_10121 | Glutamine synthetase. | Glutamate synthase (NADPH/NADH) large chain. | 0.977 |
SEA05170.1 | SEA46534.1 | SAMN04488051_101492 | SAMN04488051_103319 | Glutamine synthetase. | Tagatose-6-phosphate ketose/aldose isomerase. | 0.654 |
SEA05170.1 | carB | SAMN04488051_101492 | SAMN04488051_104300 | Glutamine synthetase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.760 |
SEA05170.1 | glmS | SAMN04488051_101492 | SAMN04488051_105102 | Glutamine synthetase. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.785 |
SEA05170.1 | purL | SAMN04488051_101492 | SAMN04488051_11181 | Glutamine synthetase. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.815 |
SEA41184.1 | SDZ92191.1 | SAMN04488051_10395 | SAMN04488051_10121 | Phosphotransferase system IIA component. | Glutamate synthase (NADPH/NADH) large chain. | 0.427 |
SEA41184.1 | SEA46534.1 | SAMN04488051_10395 | SAMN04488051_103319 | Phosphotransferase system IIA component. | Tagatose-6-phosphate ketose/aldose isomerase. | 0.584 |
SEA41184.1 | glmM | SAMN04488051_10395 | SAMN04488051_104293 | Phosphotransferase system IIA component. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.887 |
SEA41184.1 | glmS | SAMN04488051_10395 | SAMN04488051_105102 | Phosphotransferase system IIA component. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.804 |
SEA41184.1 | pgi | SAMN04488051_10395 | SAMN04488051_101169 | Phosphotransferase system IIA component. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.942 |
SEA41184.1 | purA | SAMN04488051_10395 | SAMN04488051_101519 | Phosphotransferase system IIA component. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.481 |
SEA41184.1 | purL | SAMN04488051_10395 | SAMN04488051_11181 | Phosphotransferase system IIA component. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.496 |
SEA46534.1 | SEA05170.1 | SAMN04488051_103319 | SAMN04488051_101492 | Tagatose-6-phosphate ketose/aldose isomerase. | Glutamine synthetase. | 0.654 |
page 1 of 4