Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ96755.1 | SDZ98849.1 | SAMN04488051_101182 | SAMN04488051_101250 | Signal transduction histidine kinase. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.999 |
SDZ96755.1 | SEA07852.1 | SAMN04488051_101182 | SAMN04488051_101581 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SDZ96755.1 | SEA23013.1 | SAMN04488051_101182 | SAMN04488051_102185 | Signal transduction histidine kinase. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SDZ96755.1 | SEA23276.1 | SAMN04488051_101182 | SAMN04488051_102196 | Signal transduction histidine kinase. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SDZ96755.1 | SEA27386.1 | SAMN04488051_101182 | SAMN04488051_102368 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SDZ96755.1 | SEA78004.1 | SAMN04488051_101182 | SAMN04488051_106116 | Signal transduction histidine kinase. | Phosphonate transport system substrate-binding protein. | 0.779 |
SDZ98849.1 | SDZ96755.1 | SAMN04488051_101250 | SAMN04488051_101182 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | Signal transduction histidine kinase. | 0.999 |
SDZ98849.1 | SEA07852.1 | SAMN04488051_101250 | SAMN04488051_101581 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | Signal transduction histidine kinase. | 0.999 |
SDZ98849.1 | SEA23013.1 | SAMN04488051_101250 | SAMN04488051_102185 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SDZ98849.1 | SEA23276.1 | SAMN04488051_101250 | SAMN04488051_102196 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SDZ98849.1 | SEA27386.1 | SAMN04488051_101250 | SAMN04488051_102368 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | PAS domain S-box-containing protein. | 0.999 |
SDZ98849.1 | SEA78004.1 | SAMN04488051_101250 | SAMN04488051_106116 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | Phosphonate transport system substrate-binding protein. | 0.741 |
SEA07852.1 | SDZ96755.1 | SAMN04488051_101581 | SAMN04488051_101182 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SEA07852.1 | SDZ98849.1 | SAMN04488051_101581 | SAMN04488051_101250 | Signal transduction histidine kinase. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.999 |
SEA07852.1 | SEA23013.1 | SAMN04488051_101581 | SAMN04488051_102185 | Signal transduction histidine kinase. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SEA07852.1 | SEA23276.1 | SAMN04488051_101581 | SAMN04488051_102196 | Signal transduction histidine kinase. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SEA07852.1 | SEA27386.1 | SAMN04488051_101581 | SAMN04488051_102368 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SEA07852.1 | SEA78004.1 | SAMN04488051_101581 | SAMN04488051_106116 | Signal transduction histidine kinase. | Phosphonate transport system substrate-binding protein. | 0.719 |
SEA23013.1 | SDZ96755.1 | SAMN04488051_102185 | SAMN04488051_101182 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Signal transduction histidine kinase. | 0.999 |
SEA23013.1 | SDZ98849.1 | SAMN04488051_102185 | SAMN04488051_101250 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.999 |
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