Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ95243.1 | SDZ95304.1 | SAMN04488051_101133 | SAMN04488051_101135 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.987 |
SDZ95243.1 | SDZ96755.1 | SAMN04488051_101133 | SAMN04488051_101182 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDZ95243.1 | SDZ98849.1 | SAMN04488051_101133 | SAMN04488051_101250 | PAS domain S-box-containing protein. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.998 |
SDZ95243.1 | SEA07852.1 | SAMN04488051_101133 | SAMN04488051_101581 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.996 |
SDZ95243.1 | SEA27386.1 | SAMN04488051_101133 | SAMN04488051_102368 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.996 |
SDZ95243.1 | SEA27575.1 | SAMN04488051_101133 | SAMN04488051_102376 | PAS domain S-box-containing protein. | Serine/threonine protein kinase and signal transduction histidine kinase with GAF sensor. | 0.997 |
SDZ95243.1 | SEA75790.1 | SAMN04488051_101133 | SAMN04488051_10614 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.988 |
SDZ95243.1 | SEA81716.1 | SAMN04488051_101133 | SAMN04488051_106298 | PAS domain S-box-containing protein. | Two-component system, response regulator RegA. | 0.813 |
SDZ95243.1 | SEA81732.1 | SAMN04488051_101133 | SAMN04488051_106299 | PAS domain S-box-containing protein. | Two-component system, sensor histidine kinase RegB. | 0.604 |
SDZ95243.1 | SEA93084.1 | SAMN04488051_101133 | SAMN04488051_10950 | PAS domain S-box-containing protein. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.997 |
SDZ95304.1 | SDZ95243.1 | SAMN04488051_101135 | SAMN04488051_101133 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.987 |
SDZ95304.1 | SDZ96755.1 | SAMN04488051_101135 | SAMN04488051_101182 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDZ95304.1 | SDZ98849.1 | SAMN04488051_101135 | SAMN04488051_101250 | PAS domain S-box-containing protein. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.998 |
SDZ95304.1 | SEA07852.1 | SAMN04488051_101135 | SAMN04488051_101581 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.996 |
SDZ95304.1 | SEA27386.1 | SAMN04488051_101135 | SAMN04488051_102368 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.996 |
SDZ95304.1 | SEA27575.1 | SAMN04488051_101135 | SAMN04488051_102376 | PAS domain S-box-containing protein. | Serine/threonine protein kinase and signal transduction histidine kinase with GAF sensor. | 0.997 |
SDZ95304.1 | SEA75790.1 | SAMN04488051_101135 | SAMN04488051_10614 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.988 |
SDZ95304.1 | SEA81716.1 | SAMN04488051_101135 | SAMN04488051_106298 | PAS domain S-box-containing protein. | Two-component system, response regulator RegA. | 0.821 |
SDZ95304.1 | SEA81732.1 | SAMN04488051_101135 | SAMN04488051_106299 | PAS domain S-box-containing protein. | Two-component system, sensor histidine kinase RegB. | 0.604 |
SDZ95304.1 | SEA93084.1 | SAMN04488051_101135 | SAMN04488051_10950 | PAS domain S-box-containing protein. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.997 |
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