STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA81772.1Hypothetical protein. (478 aa)    
Predicted Functional Partners:
SEA81786.1
Outer membrane receptor proteins, mostly Fe transport.
 
   
 0.868
SEA78502.1
Hypothetical protein.
 
  
  0.704
SEA47930.1
Hypothetical protein.
  
    0.696
cysI
Sulfite reductase (NADPH) hemoprotein beta-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.684
SEA81752.1
Hypothetical protein.
       0.623
SEA77258.1
Cytochrome c oxidase subunit 2.
  
  
  0.560
SEA10341.1
Ankyrin repeat.
    
  0.533
SEA51048.1
Hypothetical protein.
  
     0.509
cysD
Sulfate adenylyltransferase subunit 2.
     
 0.478
cysD-2
Sulfate adenylyltransferase subunit 2.
     
 0.478
Your Current Organism:
Alkalimonas amylolytica
NCBI taxonomy Id: 152573
Other names: A. amylolytica, Alkalimonas amylolytica Ma et al. 2007, CGMCC 1.3430, DSM 18337, gamma proteobacterium N10, strain N10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.