Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ95860.1 | SEA05583.1 | SAMN04488051_101153 | SAMN04488051_101506 | Penicillin-binding protein 1A. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.455 |
SDZ95860.1 | SEA06224.1 | SAMN04488051_101153 | SAMN04488051_101527 | Penicillin-binding protein 1A. | N-acetylmuramoyl-L-alanine amidase. | 0.459 |
SDZ95860.1 | SEA76911.1 | SAMN04488051_101153 | SAMN04488051_10670 | Penicillin-binding protein 1A. | Lipoprotein NlpD. | 0.409 |
SDZ95860.1 | SEA81928.1 | SAMN04488051_101153 | SAMN04488051_106310 | Penicillin-binding protein 1A. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.515 |
SDZ95860.1 | SEA90941.1 | SAMN04488051_101153 | SAMN04488051_108139 | Penicillin-binding protein 1A. | Membrane-bound lytic murein transglycosylase D. | 0.538 |
SEA05583.1 | SDZ95860.1 | SAMN04488051_101506 | SAMN04488051_101153 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Penicillin-binding protein 1A. | 0.455 |
SEA05583.1 | SEA06224.1 | SAMN04488051_101506 | SAMN04488051_101527 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | N-acetylmuramoyl-L-alanine amidase. | 0.798 |
SEA05583.1 | SEA81928.1 | SAMN04488051_101506 | SAMN04488051_106310 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.733 |
SEA05583.1 | SEA90941.1 | SAMN04488051_101506 | SAMN04488051_108139 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Membrane-bound lytic murein transglycosylase D. | 0.461 |
SEA06224.1 | SDZ95860.1 | SAMN04488051_101527 | SAMN04488051_101153 | N-acetylmuramoyl-L-alanine amidase. | Penicillin-binding protein 1A. | 0.459 |
SEA06224.1 | SEA05583.1 | SAMN04488051_101527 | SAMN04488051_101506 | N-acetylmuramoyl-L-alanine amidase. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.798 |
SEA06224.1 | SEA76911.1 | SAMN04488051_101527 | SAMN04488051_10670 | N-acetylmuramoyl-L-alanine amidase. | Lipoprotein NlpD. | 0.685 |
SEA06224.1 | SEA81928.1 | SAMN04488051_101527 | SAMN04488051_106310 | N-acetylmuramoyl-L-alanine amidase. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.654 |
SEA06224.1 | SEA90941.1 | SAMN04488051_101527 | SAMN04488051_108139 | N-acetylmuramoyl-L-alanine amidase. | Membrane-bound lytic murein transglycosylase D. | 0.862 |
SEA76911.1 | SDZ95860.1 | SAMN04488051_10670 | SAMN04488051_101153 | Lipoprotein NlpD. | Penicillin-binding protein 1A. | 0.409 |
SEA76911.1 | SEA06224.1 | SAMN04488051_10670 | SAMN04488051_101527 | Lipoprotein NlpD. | N-acetylmuramoyl-L-alanine amidase. | 0.685 |
SEA76911.1 | SEA81928.1 | SAMN04488051_10670 | SAMN04488051_106310 | Lipoprotein NlpD. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.746 |
SEA81913.1 | SEA81928.1 | SAMN04488051_106309 | SAMN04488051_106310 | Membrane protein YqaA, SNARE-associated domain. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.733 |
SEA81913.1 | fumC | SAMN04488051_106309 | SAMN04488051_106311 | Membrane protein YqaA, SNARE-associated domain. | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.412 |
SEA81928.1 | SDZ95860.1 | SAMN04488051_106310 | SAMN04488051_101153 | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | Penicillin-binding protein 1A. | 0.515 |
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