Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFR64200.1 | SFR64216.1 | SAMN02910262_00187 | SAMN02910262_00189 | Phosphoesterase RecJ domain-containing protein. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | 0.810 |
| SFR64200.1 | SFR64226.1 | SAMN02910262_00187 | SAMN02910262_00190 | Phosphoesterase RecJ domain-containing protein. | Ribosomal protein L7Ae. | 0.698 |
| SFR64200.1 | SFR64236.1 | SAMN02910262_00187 | SAMN02910262_00191 | Phosphoesterase RecJ domain-containing protein. | Hypothetical protein. | 0.712 |
| SFR64200.1 | SFR66426.1 | SAMN02910262_00187 | SAMN02910262_00386 | Phosphoesterase RecJ domain-containing protein. | Hypothetical protein. | 0.423 |
| SFR64200.1 | nusA | SAMN02910262_00187 | SAMN02910262_00192 | Phosphoesterase RecJ domain-containing protein. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.577 |
| SFR64200.1 | rbfA | SAMN02910262_00187 | SAMN02910262_00188 | Phosphoesterase RecJ domain-containing protein. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.957 |
| SFR64200.1 | rimP | SAMN02910262_00187 | SAMN02910262_00193 | Phosphoesterase RecJ domain-containing protein. | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.560 |
| SFR64200.1 | truB | SAMN02910262_00187 | SAMN02910262_00186 | Phosphoesterase RecJ domain-containing protein. | tRNA pseudouridine55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.862 |
| SFR64216.1 | SFR64200.1 | SAMN02910262_00189 | SAMN02910262_00187 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | Phosphoesterase RecJ domain-containing protein. | 0.810 |
| SFR64216.1 | SFR64226.1 | SAMN02910262_00189 | SAMN02910262_00190 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | Ribosomal protein L7Ae. | 0.996 |
| SFR64216.1 | SFR64236.1 | SAMN02910262_00189 | SAMN02910262_00191 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | Hypothetical protein. | 0.976 |
| SFR64216.1 | SFR64262.1 | SAMN02910262_00189 | SAMN02910262_00194 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | Small GTP-binding protein domain-containing protein. | 0.772 |
| SFR64216.1 | nusA | SAMN02910262_00189 | SAMN02910262_00192 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.972 |
| SFR64216.1 | rbfA | SAMN02910262_00189 | SAMN02910262_00188 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.943 |
| SFR64216.1 | rimP | SAMN02910262_00189 | SAMN02910262_00193 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.888 |
| SFR64216.1 | truB | SAMN02910262_00189 | SAMN02910262_00186 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | tRNA pseudouridine55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.961 |
| SFR64226.1 | SFR64200.1 | SAMN02910262_00190 | SAMN02910262_00187 | Ribosomal protein L7Ae. | Phosphoesterase RecJ domain-containing protein. | 0.698 |
| SFR64226.1 | SFR64216.1 | SAMN02910262_00190 | SAMN02910262_00189 | Ribosomal protein L7Ae. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | 0.996 |
| SFR64226.1 | SFR64236.1 | SAMN02910262_00190 | SAMN02910262_00191 | Ribosomal protein L7Ae. | Hypothetical protein. | 0.985 |
| SFR64226.1 | SFR64262.1 | SAMN02910262_00190 | SAMN02910262_00194 | Ribosomal protein L7Ae. | Small GTP-binding protein domain-containing protein. | 0.971 |
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