Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR67363.1 | SFR67379.1 | SAMN02910262_00494 | SAMN02910262_00496 | Arginine decarboxylase. | Saccharopine dehydrogenase (NAD+, L-lysine forming). | 0.894 |
SFR67363.1 | SFR67388.1 | SAMN02910262_00494 | SAMN02910262_00497 | Arginine decarboxylase. | Carboxynorspermidine decarboxylase. | 0.799 |
SFR67363.1 | SFR82253.1 | SAMN02910262_00494 | SAMN02910262_01908 | Arginine decarboxylase. | Arginine/lysine/ornithine decarboxylase. | 0.835 |
SFR67363.1 | aguA | SAMN02910262_00494 | SAMN02910262_00498 | Arginine decarboxylase. | Agmatine deiminase. | 0.872 |
SFR67363.1 | argD | SAMN02910262_00494 | SAMN02910262_02248 | Arginine decarboxylase. | acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.616 |
SFR67363.1 | hutG | SAMN02910262_00494 | SAMN02910262_00446 | Arginine decarboxylase. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.868 |
SFR67363.1 | speE | SAMN02910262_00494 | SAMN02910262_00495 | Arginine decarboxylase. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family. | 0.994 |
SFR67379.1 | SFR67363.1 | SAMN02910262_00496 | SAMN02910262_00494 | Saccharopine dehydrogenase (NAD+, L-lysine forming). | Arginine decarboxylase. | 0.894 |
SFR67379.1 | SFR67388.1 | SAMN02910262_00496 | SAMN02910262_00497 | Saccharopine dehydrogenase (NAD+, L-lysine forming). | Carboxynorspermidine decarboxylase. | 0.957 |
SFR67379.1 | SFR67407.1 | SAMN02910262_00496 | SAMN02910262_00499 | Saccharopine dehydrogenase (NAD+, L-lysine forming). | N-carbamoylputrescine amidase. | 0.502 |
SFR67379.1 | SFR82253.1 | SAMN02910262_00496 | SAMN02910262_01908 | Saccharopine dehydrogenase (NAD+, L-lysine forming). | Arginine/lysine/ornithine decarboxylase. | 0.453 |
SFR67379.1 | hutG | SAMN02910262_00496 | SAMN02910262_00446 | Saccharopine dehydrogenase (NAD+, L-lysine forming). | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.506 |
SFR67379.1 | speE | SAMN02910262_00496 | SAMN02910262_00495 | Saccharopine dehydrogenase (NAD+, L-lysine forming). | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family. | 0.910 |
SFR67388.1 | SFR67363.1 | SAMN02910262_00497 | SAMN02910262_00494 | Carboxynorspermidine decarboxylase. | Arginine decarboxylase. | 0.799 |
SFR67388.1 | SFR67379.1 | SAMN02910262_00497 | SAMN02910262_00496 | Carboxynorspermidine decarboxylase. | Saccharopine dehydrogenase (NAD+, L-lysine forming). | 0.957 |
SFR67388.1 | SFR67407.1 | SAMN02910262_00497 | SAMN02910262_00499 | Carboxynorspermidine decarboxylase. | N-carbamoylputrescine amidase. | 0.644 |
SFR67388.1 | SFR82253.1 | SAMN02910262_00497 | SAMN02910262_01908 | Carboxynorspermidine decarboxylase. | Arginine/lysine/ornithine decarboxylase. | 0.401 |
SFR67388.1 | aguA | SAMN02910262_00497 | SAMN02910262_00498 | Carboxynorspermidine decarboxylase. | Agmatine deiminase. | 0.732 |
SFR67388.1 | argD | SAMN02910262_00497 | SAMN02910262_02248 | Carboxynorspermidine decarboxylase. | acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.496 |
SFR67388.1 | hutG | SAMN02910262_00497 | SAMN02910262_00446 | Carboxynorspermidine decarboxylase. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.486 |
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