STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR70638.1CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase. (487 aa)    
Predicted Functional Partners:
SFR70645.1
Nucleoside-diphosphate-sugar epimerase.
 
   
0.760
SFR70652.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
    0.672
SFR70657.1
Glycosyl transferases group 1.
     
 0.654
SFR70663.1
Glucose-1-phosphate cytidylyltransferase.
  
    0.574
SFR75887.1
TIGR02172 family protein.
  
     0.539
SFR70634.1
Virginiamycin A acetyltransferase.
       0.523
SFR77571.1
Choline kinase.
  
  
 0.519
SFR70668.1
Tetratricopeptide repeat-containing protein.
  
    0.497
SFR89682.1
LysM domain-containing protein.
  
     0.494
SFR84753.1
Flagella basal body rod protein; Belongs to the flagella basal body rod proteins family.
  
    0.479
Your Current Organism:
Clostridium aminophilum
NCBI taxonomy Id: 1526
Other names: ATCC 49906, DSM 10710, [. aminophilum, [Clostridium] aminophilum, strain F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.