Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR71616.1 | SFR73585.1 | SAMN02910262_00971 | SAMN02910262_01147 | Transcriptional regulator, contains XRE-family HTH domain. | Hypothetical protein. | 0.403 |
SFR73576.1 | SFR73585.1 | SAMN02910262_01146 | SAMN02910262_01147 | Helix-turn-helix. | Hypothetical protein. | 0.773 |
SFR73585.1 | SFR71616.1 | SAMN02910262_01147 | SAMN02910262_00971 | Hypothetical protein. | Transcriptional regulator, contains XRE-family HTH domain. | 0.403 |
SFR73585.1 | SFR73576.1 | SAMN02910262_01147 | SAMN02910262_01146 | Hypothetical protein. | Helix-turn-helix. | 0.773 |
SFR73585.1 | SFR75351.1 | SAMN02910262_01147 | SAMN02910262_01303 | Hypothetical protein. | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.504 |
SFR73585.1 | SFR78841.1 | SAMN02910262_01147 | SAMN02910262_01547 | Hypothetical protein. | Protein of unknown function. | 0.429 |
SFR73585.1 | SFR81619.1 | SAMN02910262_01147 | SAMN02910262_01845 | Hypothetical protein. | Hypothetical protein. | 0.623 |
SFR73585.1 | SFR87914.1 | SAMN02910262_01147 | SAMN02910262_02373 | Hypothetical protein. | Putative transcriptional regulator. | 0.874 |
SFR73585.1 | SFR88338.1 | SAMN02910262_01147 | SAMN02910262_02411 | Hypothetical protein. | Leucine rich repeat-containing protein. | 0.488 |
SFR73585.1 | SFR91828.1 | SAMN02910262_01147 | SAMN02910262_02632 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.498 |
SFR75351.1 | SFR73585.1 | SAMN02910262_01303 | SAMN02910262_01147 | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | Hypothetical protein. | 0.504 |
SFR75351.1 | SFR88338.1 | SAMN02910262_01303 | SAMN02910262_02411 | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | Leucine rich repeat-containing protein. | 0.517 |
SFR78841.1 | SFR73585.1 | SAMN02910262_01547 | SAMN02910262_01147 | Protein of unknown function. | Hypothetical protein. | 0.429 |
SFR81619.1 | SFR73585.1 | SAMN02910262_01845 | SAMN02910262_01147 | Hypothetical protein. | Hypothetical protein. | 0.623 |
SFR87914.1 | SFR73585.1 | SAMN02910262_02373 | SAMN02910262_01147 | Putative transcriptional regulator. | Hypothetical protein. | 0.874 |
SFR88338.1 | SFR73585.1 | SAMN02910262_02411 | SAMN02910262_01147 | Leucine rich repeat-containing protein. | Hypothetical protein. | 0.488 |
SFR88338.1 | SFR75351.1 | SAMN02910262_02411 | SAMN02910262_01303 | Leucine rich repeat-containing protein. | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.517 |
SFR91828.1 | SFR73585.1 | SAMN02910262_02632 | SAMN02910262_01147 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.498 |