STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR77007.1Hypothetical protein. (793 aa)    
Predicted Functional Partners:
SFR77047.1
Hypothetical protein.
       0.783
SFR77017.1
D-sedoheptulose 7-phosphate isomerase.
       0.781
SFR77037.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
       0.776
SFR77027.1
Radical SAM superfamily enzyme YgiQ, UPF0313 family.
       0.774
SFR82367.1
Undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.616
SFR77058.1
Glucose-1-phosphate cytidylyltransferase.
       0.512
SFR77068.1
CDP-glucose 4,6-dehydratase.
       0.508
SFR76985.1
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
       0.464
SFR76995.1
D,D-heptose 1,7-bisphosphate phosphatase.
       0.463
SFR74138.1
O-antigen ligase.
  
    0.449
Your Current Organism:
Clostridium aminophilum
NCBI taxonomy Id: 1526
Other names: ATCC 49906, DSM 10710, [. aminophilum, [Clostridium] aminophilum, strain F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.