STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR77214.1RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (377 aa)    
Predicted Functional Partners:
SFR77225.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.973
SFR63109.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.897
SFR82420.1
Putative ABC transport system permease protein.
 
 
 0.762
SFR69457.1
PTS system, D-glucosamine-specific IIC component.
     
 0.684
SFR77240.1
Hypothetical protein.
  
  0.670
SFR77251.1
Outer membrane efflux protein.
  
  0.624
SFR77204.1
Transcriptional regulator, TetR family.
 
     0.545
SFR82414.1
Putative ABC transport system ATP-binding protein.
 
 
 0.524
SFR82411.1
HlyD family secretion protein.
  
     0.497
SFR63093.1
Outer membrane efflux protein.
  
  0.441
Your Current Organism:
Clostridium aminophilum
NCBI taxonomy Id: 1526
Other names: ATCC 49906, DSM 10710, [. aminophilum, [Clostridium] aminophilum, strain F
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