STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR77861.1enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)    
Predicted Functional Partners:
SFR77852.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.998
SFR77872.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.998
SFR77881.1
Acyl-CoA dehydrogenase.
 
 0.979
SFR68288.1
Signal transduction histidine kinase.
   
 0.975
SFR90662.1
butyryl-CoA dehydrogenase.
 
 0.950
SFR67000.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.949
SFR73516.1
butyryl-CoA dehydrogenase.
 
 0.897
rpmG
Large subunit ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
    
 
 0.896
rpsI
Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
   0.859
rpsB
Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
    
 
 0.859
Your Current Organism:
Clostridium aminophilum
NCBI taxonomy Id: 1526
Other names: ATCC 49906, DSM 10710, [. aminophilum, [Clostridium] aminophilum, strain F
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