Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SFR83330.1Putative efflux protein, MATE family. (456 aa)    
Predicted Functional Partners:
SFR83321.1
4Fe-4S dicluster domain-containing protein.
  
    0.774
SFR74093.1
Na+-driven multidrug efflux pump.
  
     0.696
SFR85204.1
Na+-driven multidrug efflux pump.
  
     0.461
SFR83337.1
DNA-binding transcriptional regulator, MarR family.
  
    0.434
SFR80294.1
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
    0.407
Your Current Organism:
Clostridium aminophilum
NCBI taxonomy Id: 1526
Other names: ATCC 49906, DSM 10710, [. aminophilum, [Clostridium] aminophilum, strain F
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