STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR83337.1DNA-binding transcriptional regulator, MarR family. (165 aa)    
Predicted Functional Partners:
SFR69457.1
PTS system, D-glucosamine-specific IIC component.
   
 
 0.820
SFR74978.1
PTS system, sucrose-specific IIC component.
     
 0.627
SFR75790.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
   
 0.578
SFR83353.1
Predicted transcriptional regulators.
 
 
   0.547
SFR83345.1
8-oxo-dGTP diphosphatase.
       0.521
SFR83321.1
4Fe-4S dicluster domain-containing protein.
 
     0.506
SFR83330.1
Putative efflux protein, MATE family.
  
    0.434
SFR66286.1
Transcriptional regulator, TetR family.
  
     0.426
SFR69704.1
Site-specific recombinase XerD.
  
    0.405
Your Current Organism:
Clostridium aminophilum
NCBI taxonomy Id: 1526
Other names: ATCC 49906, DSM 10710, [. aminophilum, [Clostridium] aminophilum, strain F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.