STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR83380.1Hypothetical protein. (88 aa)    
Predicted Functional Partners:
SFR83397.1
Hypothetical protein.
 
     0.866
SFR80487.1
Protein of unknown function.
  
     0.772
SFR63861.1
Hypothetical protein.
  
     0.771
SFR80107.1
Hypothetical protein.
  
     0.769
SFR71748.1
Hypothetical protein.
  
     0.767
SFR72431.1
Protein of unknown function.
  
     0.766
SFR69635.1
Hypothetical protein.
  
     0.764
SFR63979.1
Hypothetical protein.
  
     0.763
SFR77460.1
Preprotein translocase subunit SecE; Belongs to the SecE/SEC61-gamma family.
  
     0.763
SFR77280.1
Hypothetical protein.
  
     0.762
Your Current Organism:
Clostridium aminophilum
NCBI taxonomy Id: 1526
Other names: ATCC 49906, DSM 10710, [. aminophilum, [Clostridium] aminophilum, strain F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.