STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALS96889.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)    
Predicted Functional Partners:
ALS96888.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.539
ALS96887.1
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
ALT00533.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.496
ALT00496.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.453
ALS98360.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.432
ALS99626.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.419
ALS99120.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.415
ALS97178.1
Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.410
ALS98943.1
Phosphoribosylformylglycinamidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.409
ALS98727.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.402
Your Current Organism:
Lacimicrobium alkaliphilum
NCBI taxonomy Id: 1526571
Other names: Alteromonadaceae bacterium X13M-12, CGMCC 1.12923, KCTC 42674, L. alkaliphilum, Lacimicrobium alkaliphilum Zhong et al. 2016, strain X13M-12
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.