STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOO83703.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)    
Predicted Functional Partners:
AOO83701.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.932
AOO83702.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.876
AOO83699.1
Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.851
AOO84830.1
Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.848
AOO83700.1
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
    0.760
AOO83698.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.691
AOO84156.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.567
AOO79409.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.546
AOO80291.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.541
AOO79111.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.540
Your Current Organism:
Bosea vaviloviae
NCBI taxonomy Id: 1526658
Other names: B. vaviloviae, Bosea sp. Vaf-17, Bosea sp. Vaf-18, Bosea sp. Vaf-43, Bosea vaviloviae Safronova et al. 2015, LMG 28367, LMG:28367, RCAM 02129, strain Vaf-18, strain Vaf18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.