STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMJ54740.1Protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)    
Predicted Functional Partners:
KMJ54723.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.883
KMJ54739.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.705
KMJ53956.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.675
KMJ53729.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.675
KMJ52544.1
Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.635
argS
arginyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.560
KMJ54722.1
Sterol-binding domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.547
udk
Uridine kinase; Functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.475
KMJ54737.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.433
KMJ54738.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.433
Your Current Organism:
Vogesella sp. EB
NCBI taxonomy Id: 1526735
Other names: V. sp. EB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.