KMJ53934.1 protein (Vogesella sp. EB) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

KMJ53934.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)

Predicted Functional Partners:

KMJ54027.1

0.773

argA

0.627

KMJ54646.1

0.550

KMJ52087.1

0.550

KMJ53933.1

0.531

KMJ53945.1

0.471

Your Current Organism:

Vogesella sp. EB

NCBI taxonomy Id: 1526735
Other names: V. sp. EB

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KMJ52087.1	KMJ53934.1	ACG97_15555	ACG97_05255	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
KMJ52087.1	KMJ53945.1	ACG97_15555	ACG97_05310	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.809
KMJ52087.1	KMJ54646.1	ACG97_15555	ACG97_02595	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.706
KMJ52087.1	argA	ACG97_15555	ACG97_04930	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetyltransferase family. ArgA subfamily.	0.733
KMJ53933.1	KMJ53934.1	ACG97_05245	ACG97_05255	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
KMJ53933.1	KMJ54027.1	ACG97_05245	ACG97_05250	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
KMJ53934.1	KMJ52087.1	ACG97_05255	ACG97_15555	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
KMJ53934.1	KMJ53933.1	ACG97_05255	ACG97_05245	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
KMJ53934.1	KMJ53945.1	ACG97_05255	ACG97_05310	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.471
KMJ53934.1	KMJ54027.1	ACG97_05255	ACG97_05250	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
KMJ53934.1	KMJ54646.1	ACG97_05255	ACG97_02595	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
KMJ53934.1	argA	ACG97_05255	ACG97_04930	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetyltransferase family. ArgA subfamily.	0.627
KMJ53945.1	KMJ52087.1	ACG97_05310	ACG97_15555	XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.809
KMJ53945.1	KMJ53934.1	ACG97_05310	ACG97_05255	XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.471
KMJ53945.1	KMJ54646.1	ACG97_05310	ACG97_02595	XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
KMJ53945.1	argA	ACG97_05310	ACG97_04930	XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetyltransferase family. ArgA subfamily.	0.586
KMJ54027.1	KMJ53933.1	ACG97_05250	ACG97_05245	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
KMJ54027.1	KMJ53934.1	ACG97_05250	ACG97_05255	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
KMJ54646.1	KMJ52087.1	ACG97_02595	ACG97_15555	XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.706
KMJ54646.1	KMJ53934.1	ACG97_02595	ACG97_05255	XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550