STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMJ53888.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (625 aa)    
Predicted Functional Partners:
KMJ53889.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.927
KMJ53801.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.902
KMJ53803.1
Decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.901
KMJ53802.1
Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.768
KMJ53804.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.690
KMJ53799.1
Iron-siderophore ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
     
 0.662
KMJ53798.1
Ferrichrome ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.656
KMJ53800.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.620
KMJ53722.1
Alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.605
KMJ53126.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.605
Your Current Organism:
Vogesella sp. EB
NCBI taxonomy Id: 1526735
Other names: V. sp. EB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.