STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMJ53535.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa)    
Predicted Functional Partners:
KMJ53533.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 0.987
KMJ53534.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.877
KMJ53532.1
MIP family channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.775
birA
Biofilm PGA synthesis protein PgaB; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.499
KMJ53537.1
Succinyldiaminopimelate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.446
KMJ53536.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.445
KMJ53587.1
Among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.400
Your Current Organism:
Vogesella sp. EB
NCBI taxonomy Id: 1526735
Other names: V. sp. EB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.