STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMJ52342.1Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)    
Predicted Functional Partners:
KMJ53042.1
Rhodanese; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.936
KMJ52340.1
YeeE/YedE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.724
KMJ52341.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.714
KMJ52339.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.709
KMJ54170.1
Rhodanese; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.680
KMJ52338.1
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.648
KMJ52231.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.641
KMJ52343.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.621
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.593
KMJ52125.1
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.589
Your Current Organism:
Vogesella sp. EB
NCBI taxonomy Id: 1526735
Other names: V. sp. EB
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.